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<pre><span class="sourceLineNo">001</span>/*-<a name="line.1"></a>
<span class="sourceLineNo">002</span> *******************************************************************************<a name="line.2"></a>
<span class="sourceLineNo">003</span> * Copyright (c) 2011, 2016 Diamond Light Source Ltd.<a name="line.3"></a>
<span class="sourceLineNo">004</span> * All rights reserved. This program and the accompanying materials<a name="line.4"></a>
<span class="sourceLineNo">005</span> * are made available under the terms of the Eclipse Public License v1.0<a name="line.5"></a>
<span class="sourceLineNo">006</span> * which accompanies this distribution, and is available at<a name="line.6"></a>
<span class="sourceLineNo">007</span> * http://www.eclipse.org/legal/epl-v10.html<a name="line.7"></a>
<span class="sourceLineNo">008</span> *<a name="line.8"></a>
<span class="sourceLineNo">009</span> * Contributors:<a name="line.9"></a>
<span class="sourceLineNo">010</span> *    Peter Chang - initial API and implementation and/or initial documentation<a name="line.10"></a>
<span class="sourceLineNo">011</span> *******************************************************************************/<a name="line.11"></a>
<span class="sourceLineNo">012</span><a name="line.12"></a>
<span class="sourceLineNo">013</span>package org.eclipse.january.dataset;<a name="line.13"></a>
<span class="sourceLineNo">014</span><a name="line.14"></a>
<span class="sourceLineNo">015</span>import org.eclipse.january.IMonitor;<a name="line.15"></a>
<span class="sourceLineNo">016</span><a name="line.16"></a>
<span class="sourceLineNo">017</span>public interface CompoundDataset extends Dataset {<a name="line.17"></a>
<span class="sourceLineNo">018</span><a name="line.18"></a>
<span class="sourceLineNo">019</span>        @Override<a name="line.19"></a>
<span class="sourceLineNo">020</span>        public CompoundDataset cast(boolean repeat, int dtype, int isize);<a name="line.20"></a>
<span class="sourceLineNo">021</span><a name="line.21"></a>
<span class="sourceLineNo">022</span>        @Override<a name="line.22"></a>
<span class="sourceLineNo">023</span>        public CompoundDataset cast(int dtype);<a name="line.23"></a>
<span class="sourceLineNo">024</span><a name="line.24"></a>
<span class="sourceLineNo">025</span>        @Override<a name="line.25"></a>
<span class="sourceLineNo">026</span>        public CompoundDataset clone();<a name="line.26"></a>
<span class="sourceLineNo">027</span><a name="line.27"></a>
<span class="sourceLineNo">028</span>        @Override<a name="line.28"></a>
<span class="sourceLineNo">029</span>        public CompoundDataset fill(Object obj);<a name="line.29"></a>
<span class="sourceLineNo">030</span><a name="line.30"></a>
<span class="sourceLineNo">031</span>        @Override<a name="line.31"></a>
<span class="sourceLineNo">032</span>        public CompoundDataset flatten();<a name="line.32"></a>
<span class="sourceLineNo">033</span><a name="line.33"></a>
<span class="sourceLineNo">034</span>        @Override<a name="line.34"></a>
<span class="sourceLineNo">035</span>        public CompoundDataset getBy1DIndex(IntegerDataset index);<a name="line.35"></a>
<span class="sourceLineNo">036</span><a name="line.36"></a>
<span class="sourceLineNo">037</span>        @Override<a name="line.37"></a>
<span class="sourceLineNo">038</span>        public CompoundDataset getByBoolean(Dataset selection);<a name="line.38"></a>
<span class="sourceLineNo">039</span><a name="line.39"></a>
<span class="sourceLineNo">040</span>        @Override<a name="line.40"></a>
<span class="sourceLineNo">041</span>        public CompoundDataset getByIndexes(Object... indexes);<a name="line.41"></a>
<span class="sourceLineNo">042</span><a name="line.42"></a>
<span class="sourceLineNo">043</span>        @Override<a name="line.43"></a>
<span class="sourceLineNo">044</span>        public CompoundDataset getSlice(IMonitor mon, int[] start, int[] stop, int[] step);<a name="line.44"></a>
<span class="sourceLineNo">045</span><a name="line.45"></a>
<span class="sourceLineNo">046</span>        @Override<a name="line.46"></a>
<span class="sourceLineNo">047</span>        public CompoundDataset getSlice(IMonitor mon, Slice... slice);<a name="line.47"></a>
<span class="sourceLineNo">048</span><a name="line.48"></a>
<span class="sourceLineNo">049</span>        @Override<a name="line.49"></a>
<span class="sourceLineNo">050</span>        public CompoundDataset getSlice(IMonitor mon, SliceND slice);<a name="line.50"></a>
<span class="sourceLineNo">051</span><a name="line.51"></a>
<span class="sourceLineNo">052</span>        @Override<a name="line.52"></a>
<span class="sourceLineNo">053</span>        public CompoundDataset getSlice(int[] start, int[] stop, int[] step);<a name="line.53"></a>
<span class="sourceLineNo">054</span><a name="line.54"></a>
<span class="sourceLineNo">055</span>        @Override<a name="line.55"></a>
<span class="sourceLineNo">056</span>        public CompoundDataset getSlice(Slice... slice);<a name="line.56"></a>
<span class="sourceLineNo">057</span><a name="line.57"></a>
<span class="sourceLineNo">058</span>        @Override<a name="line.58"></a>
<span class="sourceLineNo">059</span>        public CompoundDataset getSlice(SliceND slice);<a name="line.59"></a>
<span class="sourceLineNo">060</span><a name="line.60"></a>
<span class="sourceLineNo">061</span>        @Override<a name="line.61"></a>
<span class="sourceLineNo">062</span>        public CompoundDataset getSliceView(int[] start, int[] stop, int[] step);<a name="line.62"></a>
<span class="sourceLineNo">063</span><a name="line.63"></a>
<span class="sourceLineNo">064</span>        @Override<a name="line.64"></a>
<span class="sourceLineNo">065</span>        public CompoundDataset getSliceView(Slice... slice);<a name="line.65"></a>
<span class="sourceLineNo">066</span><a name="line.66"></a>
<span class="sourceLineNo">067</span>        @Override<a name="line.67"></a>
<span class="sourceLineNo">068</span>        public CompoundDataset getSliceView(SliceND slice);<a name="line.68"></a>
<span class="sourceLineNo">069</span><a name="line.69"></a>
<span class="sourceLineNo">070</span>        @Override<a name="line.70"></a>
<span class="sourceLineNo">071</span>        public CompoundDataset getTransposedView(int... axes);<a name="line.71"></a>
<span class="sourceLineNo">072</span><a name="line.72"></a>
<span class="sourceLineNo">073</span>        @Override<a name="line.73"></a>
<span class="sourceLineNo">074</span>        public CompoundDataset getView(boolean deepCopyMetadata);<a name="line.74"></a>
<span class="sourceLineNo">075</span><a name="line.75"></a>
<span class="sourceLineNo">076</span>        @Override<a name="line.76"></a>
<span class="sourceLineNo">077</span>        public CompoundDataset getBroadcastView(int... shape);<a name="line.77"></a>
<span class="sourceLineNo">078</span><a name="line.78"></a>
<span class="sourceLineNo">079</span>        @Override<a name="line.79"></a>
<span class="sourceLineNo">080</span>        public CompoundDataset iadd(Object o);<a name="line.80"></a>
<span class="sourceLineNo">081</span><a name="line.81"></a>
<span class="sourceLineNo">082</span>        @Override<a name="line.82"></a>
<span class="sourceLineNo">083</span>        public CompoundDataset idivide(Object o);<a name="line.83"></a>
<span class="sourceLineNo">084</span><a name="line.84"></a>
<span class="sourceLineNo">085</span>        @Override<a name="line.85"></a>
<span class="sourceLineNo">086</span>        public CompoundDataset ifloor();<a name="line.86"></a>
<span class="sourceLineNo">087</span><a name="line.87"></a>
<span class="sourceLineNo">088</span>        @Override<a name="line.88"></a>
<span class="sourceLineNo">089</span>        public CompoundDataset ifloorDivide(Object o);<a name="line.89"></a>
<span class="sourceLineNo">090</span><a name="line.90"></a>
<span class="sourceLineNo">091</span>        @Override<a name="line.91"></a>
<span class="sourceLineNo">092</span>        public CompoundDataset imultiply(Object o);<a name="line.92"></a>
<span class="sourceLineNo">093</span><a name="line.93"></a>
<span class="sourceLineNo">094</span>        @Override<a name="line.94"></a>
<span class="sourceLineNo">095</span>        public CompoundDataset ipower(Object o);<a name="line.95"></a>
<span class="sourceLineNo">096</span><a name="line.96"></a>
<span class="sourceLineNo">097</span>        @Override<a name="line.97"></a>
<span class="sourceLineNo">098</span>        public CompoundDataset iremainder(Object o);<a name="line.98"></a>
<span class="sourceLineNo">099</span><a name="line.99"></a>
<span class="sourceLineNo">100</span>        @Override<a name="line.100"></a>
<span class="sourceLineNo">101</span>        public CompoundDataset isubtract(Object o);<a name="line.101"></a>
<span class="sourceLineNo">102</span><a name="line.102"></a>
<span class="sourceLineNo">103</span>        @Override<a name="line.103"></a>
<span class="sourceLineNo">104</span>        public CompoundDataset reshape(int... shape);<a name="line.104"></a>
<span class="sourceLineNo">105</span><a name="line.105"></a>
<span class="sourceLineNo">106</span>        @Override<a name="line.106"></a>
<span class="sourceLineNo">107</span>        public CompoundDataset setBy1DIndex(Object obj, Dataset index);<a name="line.107"></a>
<span class="sourceLineNo">108</span><a name="line.108"></a>
<span class="sourceLineNo">109</span>        @Override<a name="line.109"></a>
<span class="sourceLineNo">110</span>        public CompoundDataset setByBoolean(Object obj, Dataset selection);<a name="line.110"></a>
<span class="sourceLineNo">111</span><a name="line.111"></a>
<span class="sourceLineNo">112</span>        @Override<a name="line.112"></a>
<span class="sourceLineNo">113</span>        public CompoundDataset setByIndexes(Object obj, Object... indexes);<a name="line.113"></a>
<span class="sourceLineNo">114</span><a name="line.114"></a>
<span class="sourceLineNo">115</span>        @Override<a name="line.115"></a>
<span class="sourceLineNo">116</span>        public CompoundDataset setSlice(Object obj, IndexIterator iterator);<a name="line.116"></a>
<span class="sourceLineNo">117</span><a name="line.117"></a>
<span class="sourceLineNo">118</span>        @Override<a name="line.118"></a>
<span class="sourceLineNo">119</span>        public CompoundDataset setSlice(Object obj, int[] start, int[] stop, int[] step);<a name="line.119"></a>
<span class="sourceLineNo">120</span><a name="line.120"></a>
<span class="sourceLineNo">121</span>        @Override<a name="line.121"></a>
<span class="sourceLineNo">122</span>        public CompoundDataset setSlice(Object object, Slice... slice);<a name="line.122"></a>
<span class="sourceLineNo">123</span><a name="line.123"></a>
<span class="sourceLineNo">124</span>        @Override<a name="line.124"></a>
<span class="sourceLineNo">125</span>        public CompoundDataset sort(Integer axis);<a name="line.125"></a>
<span class="sourceLineNo">126</span><a name="line.126"></a>
<span class="sourceLineNo">127</span>        @Override<a name="line.127"></a>
<span class="sourceLineNo">128</span>        public CompoundDataset squeezeEnds();<a name="line.128"></a>
<span class="sourceLineNo">129</span><a name="line.129"></a>
<span class="sourceLineNo">130</span>        @Override<a name="line.130"></a>
<span class="sourceLineNo">131</span>        public CompoundDataset squeeze();<a name="line.131"></a>
<span class="sourceLineNo">132</span><a name="line.132"></a>
<span class="sourceLineNo">133</span>        @Override<a name="line.133"></a>
<span class="sourceLineNo">134</span>        public CompoundDataset squeeze(boolean onlyFromEnd);<a name="line.134"></a>
<span class="sourceLineNo">135</span><a name="line.135"></a>
<span class="sourceLineNo">136</span>        @Override<a name="line.136"></a>
<span class="sourceLineNo">137</span>        public CompoundDataset swapAxes(int axis1, int axis2);<a name="line.137"></a>
<span class="sourceLineNo">138</span><a name="line.138"></a>
<span class="sourceLineNo">139</span>        @Override<a name="line.139"></a>
<span class="sourceLineNo">140</span>        public CompoundDataset synchronizedCopy();<a name="line.140"></a>
<span class="sourceLineNo">141</span><a name="line.141"></a>
<span class="sourceLineNo">142</span>        @Override<a name="line.142"></a>
<span class="sourceLineNo">143</span>        public CompoundDataset transpose(int... axes);<a name="line.143"></a>
<span class="sourceLineNo">144</span><a name="line.144"></a>
<span class="sourceLineNo">145</span>        /**<a name="line.145"></a>
<span class="sourceLineNo">146</span>         * @since 2.0<a name="line.146"></a>
<span class="sourceLineNo">147</span>         */<a name="line.147"></a>
<span class="sourceLineNo">148</span>        @Override<a name="line.148"></a>
<span class="sourceLineNo">149</span>        public CompoundDataset max(int axis, boolean... ignoreInvalids);<a name="line.149"></a>
<span class="sourceLineNo">150</span><a name="line.150"></a>
<span class="sourceLineNo">151</span>        /**<a name="line.151"></a>
<span class="sourceLineNo">152</span>         * @since 2.0<a name="line.152"></a>
<span class="sourceLineNo">153</span>         */<a name="line.153"></a>
<span class="sourceLineNo">154</span>        @Override<a name="line.154"></a>
<span class="sourceLineNo">155</span>        public CompoundDataset min(int axis, boolean... ignoreInvalids);<a name="line.155"></a>
<span class="sourceLineNo">156</span><a name="line.156"></a>
<span class="sourceLineNo">157</span>        /**<a name="line.157"></a>
<span class="sourceLineNo">158</span>         * @since 2.0<a name="line.158"></a>
<span class="sourceLineNo">159</span>         */<a name="line.159"></a>
<span class="sourceLineNo">160</span>        @Override<a name="line.160"></a>
<span class="sourceLineNo">161</span>        public CompoundDataset peakToPeak(int axis, boolean... ignoreInvalids);<a name="line.161"></a>
<span class="sourceLineNo">162</span><a name="line.162"></a>
<span class="sourceLineNo">163</span>        /**<a name="line.163"></a>
<span class="sourceLineNo">164</span>         * @since 2.0<a name="line.164"></a>
<span class="sourceLineNo">165</span>         */<a name="line.165"></a>
<span class="sourceLineNo">166</span>        @Override<a name="line.166"></a>
<span class="sourceLineNo">167</span>        public CompoundDataset sum(int axis, boolean... ignoreInvalids);<a name="line.167"></a>
<span class="sourceLineNo">168</span><a name="line.168"></a>
<span class="sourceLineNo">169</span>        /**<a name="line.169"></a>
<span class="sourceLineNo">170</span>         * @since 2.0<a name="line.170"></a>
<span class="sourceLineNo">171</span>         */<a name="line.171"></a>
<span class="sourceLineNo">172</span>        @Override<a name="line.172"></a>
<span class="sourceLineNo">173</span>        public CompoundDataset product(int axis, boolean... ignoreInvalids);<a name="line.173"></a>
<span class="sourceLineNo">174</span><a name="line.174"></a>
<span class="sourceLineNo">175</span>        /**<a name="line.175"></a>
<span class="sourceLineNo">176</span>         * @since 2.0<a name="line.176"></a>
<span class="sourceLineNo">177</span>         */<a name="line.177"></a>
<span class="sourceLineNo">178</span>        @Override<a name="line.178"></a>
<span class="sourceLineNo">179</span>        public CompoundDataset mean(int axis, boolean... ignoreInvalids);<a name="line.179"></a>
<span class="sourceLineNo">180</span><a name="line.180"></a>
<span class="sourceLineNo">181</span>        /**<a name="line.181"></a>
<span class="sourceLineNo">182</span>         * @since 2.0<a name="line.182"></a>
<span class="sourceLineNo">183</span>         */<a name="line.183"></a>
<span class="sourceLineNo">184</span>        @Override<a name="line.184"></a>
<span class="sourceLineNo">185</span>        public CompoundDataset rootMeanSquare(int axis, boolean... ignoreInvalids);<a name="line.185"></a>
<span class="sourceLineNo">186</span><a name="line.186"></a>
<span class="sourceLineNo">187</span>        @Override<a name="line.187"></a>
<span class="sourceLineNo">188</span>        public CompoundDataset stdDeviation(int axis);<a name="line.188"></a>
<span class="sourceLineNo">189</span><a name="line.189"></a>
<span class="sourceLineNo">190</span>        /**<a name="line.190"></a>
<span class="sourceLineNo">191</span>         * @since 2.0<a name="line.191"></a>
<span class="sourceLineNo">192</span>         */<a name="line.192"></a>
<span class="sourceLineNo">193</span>        @Override<a name="line.193"></a>
<span class="sourceLineNo">194</span>        public CompoundDataset stdDeviation(int axis, boolean isWholePopulation, boolean... ignoreInvalids);<a name="line.194"></a>
<span class="sourceLineNo">195</span><a name="line.195"></a>
<span class="sourceLineNo">196</span>        @Override<a name="line.196"></a>
<span class="sourceLineNo">197</span>        public CompoundDataset variance(int axis);<a name="line.197"></a>
<span class="sourceLineNo">198</span><a name="line.198"></a>
<span class="sourceLineNo">199</span>        /**<a name="line.199"></a>
<span class="sourceLineNo">200</span>         * @since 2.0<a name="line.200"></a>
<span class="sourceLineNo">201</span>         */<a name="line.201"></a>
<span class="sourceLineNo">202</span>        @Override<a name="line.202"></a>
<span class="sourceLineNo">203</span>        public CompoundDataset variance(int axis, boolean isWholePopulation, boolean... ignoreInvalids);<a name="line.203"></a>
<span class="sourceLineNo">204</span><a name="line.204"></a>
<span class="sourceLineNo">205</span>        /**<a name="line.205"></a>
<span class="sourceLineNo">206</span>         * Get first item as a double array<a name="line.206"></a>
<span class="sourceLineNo">207</span>         * @param darray double array must be allocated and have sufficient length<a name="line.207"></a>
<span class="sourceLineNo">208</span>         * @since 2.0<a name="line.208"></a>
<span class="sourceLineNo">209</span>         */<a name="line.209"></a>
<span class="sourceLineNo">210</span>        public void getDoubleArray(double[] darray);<a name="line.210"></a>
<span class="sourceLineNo">211</span><a name="line.211"></a>
<span class="sourceLineNo">212</span>        /**<a name="line.212"></a>
<span class="sourceLineNo">213</span>         * Get an item as a double array<a name="line.213"></a>
<span class="sourceLineNo">214</span>         * @param darray double array must be allocated and have sufficient length<a name="line.214"></a>
<span class="sourceLineNo">215</span>         * @param i<a name="line.215"></a>
<span class="sourceLineNo">216</span>         */<a name="line.216"></a>
<span class="sourceLineNo">217</span>        public void getDoubleArray(double[] darray, final int i);<a name="line.217"></a>
<span class="sourceLineNo">218</span><a name="line.218"></a>
<span class="sourceLineNo">219</span>        /**<a name="line.219"></a>
<span class="sourceLineNo">220</span>         * Get an item as a double array<a name="line.220"></a>
<span class="sourceLineNo">221</span>         * @param darray double array must be allocated and have sufficient length<a name="line.221"></a>
<span class="sourceLineNo">222</span>         * @param i<a name="line.222"></a>
<span class="sourceLineNo">223</span>         * @param j<a name="line.223"></a>
<span class="sourceLineNo">224</span>         */<a name="line.224"></a>
<span class="sourceLineNo">225</span>        public void getDoubleArray(double[] darray, final int i, final int j);<a name="line.225"></a>
<span class="sourceLineNo">226</span><a name="line.226"></a>
<span class="sourceLineNo">227</span>        /**<a name="line.227"></a>
<span class="sourceLineNo">228</span>         * Get an item as a double array<a name="line.228"></a>
<span class="sourceLineNo">229</span>         * @param darray double array must be allocated and have sufficient length<a name="line.229"></a>
<span class="sourceLineNo">230</span>         * @param pos<a name="line.230"></a>
<span class="sourceLineNo">231</span>         */<a name="line.231"></a>
<span class="sourceLineNo">232</span>        public void getDoubleArray(double[] darray, final int... pos);<a name="line.232"></a>
<span class="sourceLineNo">233</span><a name="line.233"></a>
<span class="sourceLineNo">234</span>        /**<a name="line.234"></a>
<span class="sourceLineNo">235</span>         * Get an item as a double array<a name="line.235"></a>
<span class="sourceLineNo">236</span>         * @param index<a name="line.236"></a>
<span class="sourceLineNo">237</span>         * @param darray double array must be allocated and have sufficient length<a name="line.237"></a>
<span class="sourceLineNo">238</span>         */<a name="line.238"></a>
<span class="sourceLineNo">239</span>        public void getDoubleArrayAbs(int index, double[] darray);<a name="line.239"></a>
<span class="sourceLineNo">240</span><a name="line.240"></a>
<span class="sourceLineNo">241</span>        /**<a name="line.241"></a>
<span class="sourceLineNo">242</span>         * Get chosen elements from each item as a dataset<a name="line.242"></a>
<span class="sourceLineNo">243</span>         * @param element<a name="line.243"></a>
<span class="sourceLineNo">244</span>         * @return dataset of chosen elements<a name="line.244"></a>
<span class="sourceLineNo">245</span>         */<a name="line.245"></a>
<span class="sourceLineNo">246</span>        public Dataset getElements(int element);<a name="line.246"></a>
<span class="sourceLineNo">247</span><a name="line.247"></a>
<span class="sourceLineNo">248</span>        /**<a name="line.248"></a>
<span class="sourceLineNo">249</span>         * Get chosen elements from each item as a view on dataset<a name="line.249"></a>
<span class="sourceLineNo">250</span>         * @param element<a name="line.250"></a>
<span class="sourceLineNo">251</span>         * @return view dataset of chosen elements<a name="line.251"></a>
<span class="sourceLineNo">252</span>         */<a name="line.252"></a>
<span class="sourceLineNo">253</span>        public Dataset getElementsView(int element);<a name="line.253"></a>
<span class="sourceLineNo">254</span><a name="line.254"></a>
<span class="sourceLineNo">255</span>        /**<a name="line.255"></a>
<span class="sourceLineNo">256</span>         * Set values of chosen elements from each item according to source dataset<a name="line.256"></a>
<span class="sourceLineNo">257</span>         * @param source<a name="line.257"></a>
<span class="sourceLineNo">258</span>         * @param element<a name="line.258"></a>
<span class="sourceLineNo">259</span>         */<a name="line.259"></a>
<span class="sourceLineNo">260</span>        public void setElements(Dataset source, int element);<a name="line.260"></a>
<span class="sourceLineNo">261</span><a name="line.261"></a>
<span class="sourceLineNo">262</span>        /**<a name="line.262"></a>
<span class="sourceLineNo">263</span>         * Copy chosen elements from each item to another dataset<a name="line.263"></a>
<span class="sourceLineNo">264</span>         * @param destination<a name="line.264"></a>
<span class="sourceLineNo">265</span>         * @param element<a name="line.265"></a>
<span class="sourceLineNo">266</span>         */<a name="line.266"></a>
<span class="sourceLineNo">267</span>        public void copyElements(Dataset destination, int element);<a name="line.267"></a>
<span class="sourceLineNo">268</span><a name="line.268"></a>
<span class="sourceLineNo">269</span>        /**<a name="line.269"></a>
<span class="sourceLineNo">270</span>         * Get a non-compound dataset version<a name="line.270"></a>
<span class="sourceLineNo">271</span>         * @param shareData if true, share data otherwise copy it<a name="line.271"></a>
<span class="sourceLineNo">272</span>         * @return non-compound dataset<a name="line.272"></a>
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